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Archive for 2014

BRD4 assists elongation of both coding and enhancer RNAs by interacting with acetylated histones

Kanno T, Kanno Y, LeRoy G, Campos E, Sun HW, Brooks SR, Vahedi G, Heightman TD, Garcia BA, Reinberg D, Siebenlist U, O’Shea JJ, Ozato K. BRD4 assists elongation of both coding and enhancer RNAs by interacting with acetylated histones. Nat Struct Mol Biol. 2014, 21(12):1047-57.

In vivo proximity labeling for the detection of protein-protein and protein-RNA interactions

Beck DB, Narendra V, Drury WJ 3rd, Casey R, Jansen PW, Yuan ZF, Garcia BA, Vermeulen M, Bonasio R. In vivo proximity labeling for the detection of protein-protein and protein-RNA interactions. J Proteome Res. 2014, 13(12):6135-43.

Analytical tools and current challenges in the modern era of neuroepigenomics

Maze I, Shen L, Zhang B, Garcia BA, Shao N, Mitchell A, Sun H, Akbarian S, Allis CD, Nestler EJ. Analytical tools and current challenges in the modern era of neuroepigenomics. Nat Neurosci. 2014, 17(11):1476-1490.

High resolution is not a strict requirement for characterization and quantification of histone post-translational modifications

Karch KR, Zee BM, Garcia BA. High resolution is not a strict requirement for characterization and quantification of histone post-translational modifications. J Proteome Res. 2014, 13(12):6152-9.

SnapShot: Histone Modifications

Huang H, Sabari BR, Garcia BA, Allis CD, Zhao Y. SnapShot: Histone Modifications. Cell. 2014, 159(2):458-458.

Evaluation of proteomic search engines for the analysis of histone modifications

Yuan ZF, Lin S, Molden RC, Garcia BA. Evaluation of proteomic search engines for the analysis of histone modifications. J Proteome Res. 2014, 13(10):4470-8.

Histone methylation has distinct dynamics from histone acetylation in cell cycle re-entry from quiescence

Mews P, Zee BM, Liu S, Donahue G, Garcia BA, Berger SL. Histone methylation has distinct dynamics from histone acetylation in cell cycle re-entry from quiescence. Mol Cell Biol. 2014, 34(21):3968-80.

A Proteomic Glimpse into the Initial Global Epigenetic Changes During HIV Infection

Britton LM, Sova P, Belisle S, Liu S, Chan EY, Katze MG, Garcia BA. A Proteomic Glimpse into the Initial Global Epigenetic Changes During HIV Infection. Proteomics. 2014, 14(19):2226-30.

Middle-Down and Top-Down Mass Spectrometric Analysis of Co-occurring Histone Modifications

Molden RC, Garcia BA. Middle-Down and Top-Down Mass Spectrometric Analysis of Co-occurring Histone Modifications. Curr Protoc Protein Sci. 2014, 77:23.7.1-23.7.28.

Stable Isotope labeled histone peptide library for histone post-translational modification and variant quantification by mass spectrometry

Lin S, Wein S, Gonzales-Cope M, Otte GL, Yuan ZF, Afjehi-Sadat L, Maile T, Berger SL, Rush J, Lill JR, Arnott D, Garcia BA. Stable Isotope labeled histone peptide library for histone post-translational modification and variant quantification by mass spectrometry. Mol Cell Proteomics. 2014, 13(9):2450-66.