Publications

Archive for 2018

Impaired cocaine-induced behavioral plasticity in the male offspring of cocaine-experienced sires

Impaired cocaine-induced behavioral plasticity in the male offspring of cocaine-experienced sires. Wimmer ME, Vassoler FM, White SL, Schmidt HD, Sidoli S, Han Y, Garica BA, Pierce RC. Eur J Neurosci. 2019 May;49(9):1115-1126.

Proteomic approaches for cancer epigenetics research

Proteomic approaches for cancer epigenetics research. Marchione DM, Garcia BA, Wojcik J. Expert Rev Proteomics. 2018 Nov 27:1-15.

The HDAC3-SMARCA4-miR-27a axis promotes expression of the PAX3:FOXO1 fusion oncogene in rhabdomyosarcoma

The HDAC3-SMARCA4-miR-27a axis promotes expression of the PAX3:FOXO1 fusion oncogene in rhabdomyosarcoma. Bharathy N, Berlow NE, Wang E, Abraham J, Settelmeyer TP, Hooper JE, Svalina MN, Ishikawa Y, Zientek K, Bajwa Z, Goros MW, Hernandez BS, Wolff JE, Rudek MA, Xu L, Anders NM, Pal R, Harrold AP, Davies AM, Ashok A, Bushby D, Mancini M, Noakes C, Goodwin NC, Ordentlich P, Keck J, Hawkins DS, Rudzinski ER, Chatterjee B, Bächinger HP, Barr FG, Liddle J, Garcia BA, Mansoor A, Perkins TJ, Vakoc CR, Michalek JE, Keller C. Sci Signal. 2018 Nov 20;11(557).

Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer

Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer. Zhang H, Pandey S, Travers M, Sun H, Morton G, Madzo J, Chung W, Khowsathit J, Perez-Leal O, Barrero CA, Merali C, Okamoto Y, Sato T, Pan J, Garriga J, Bhanu NV, Simithy J, Patel B, Huang J, Raynal NJ, Garcia BA, Jacobson MA, Kadoch C, Merali S, Zhang Y, Childers W, Abou-Gharbia M, Karanicolas J, Baylin SB, Zahnow CA, Jelinek J, Graña X, Issa JJ. Cell. 2018 Nov 15;175(5):1244-1258.

Histone modification signatures in human sperm distinguish clinical abnormalities

Histone modification signatures in human sperm distinguish clinical abnormalities. Schon SB, Luense LJ, Wang X, Bartolomei MS, Coutifaris C, Garcia BA, Berger SL. J Assist Reprod Genet. 2019 Feb;36(2):267-275.

Target site specificity and in vivo complexity of the mammalian arginylome

Target site specificity and in vivo complexity of the mammalian arginylome. Wang J, Pejaver VR, Dann GP, Wolf MY, Kellis M, Huang Y, Garcia BA, Radivojac P, Kashina A. Sci Rep. 2018 Nov 1;8(1):16177.

Phosphorylation of TIP60 suppresses 53BP1 localization at DNA damage sites

Phosphorylation of TIP60 suppresses 53BP1 localization at DNA damage sites. Li ML, Jiang Q, Bhanu NV, Wu J, Li W, Garcia BA, Greenberg RA. Mol Cell Biol. 2018 Oct 8. pii: MCB.00209-18. doi: 10.1128/MCB.00209-18. [Epub ahead of print]

Hydrogen-Deuterium Exchange Coupled to Top- and Middle-Down Mass Spectrometry Reveals Histone Tail Dynamics before and after Nucleosome Assembly

Hydrogen-Deuterium Exchange Coupled to Top- and Middle-Down Mass Spectrometry Reveals Histone Tail Dynamics before and after Nucleosome Assembly. Karch KR, Coradin M, Zandarashvili L, Kan ZY, Gerace M, Englander SW, Black BE, Garcia BA. Structure. 2018 Dec 4;26(12):1651-1663.

Acetate Production from Glucose and Coupling to Mitochondrial Metabolism in Mammals

Acetate Production from Glucose and Coupling to Mitochondrial Metabolism in Mammals. Liu X, Cooper DE, Cluntun AA, Warmoes MO, Zhao S, Reid MA, Liu J, Lund PJ, Lopes M, Garcia BA, Wellen KE, Kirsch DG, Locasale JW. Cell. 2018 Oct 4;175(2):502-513.

Distinct Roles of Two Histone Methyltransferases in Transmitting H3K36me3-Based Epigenetic Memory Across Generations in Caenorhabditis elegans

Distinct Roles of Two Histone Methyltransferases in Transmitting H3K36me3-Based Epigenetic Memory Across Generations in Caenorhabditis elegans. Kreher J, Takasaki T, Cockrum C, Sidoli S, Garcia BA, Jensen ON, Strome S. Genetics. 2018 Nov;210(3):969-982.