Publications

Archive for 2020

Plasma proteomic profiling suggests an association between antigen driven clonal B cell expansion and ME/CFS

Plasma proteomic profiling suggests an association between antigen driven clonal B cell expansion and ME/CFS.  Milivojevic M, Che X, Bateman L, Cheng A, Garcia BA, Hornig M, Huber M, Klimas NG, Lee B, Lee H, Levine S, Montoya JG, Peterson DL, Komaroff AL, Lipkin WI. PLoS One. 2020 Jul 21;15(7):e0236148.

Adenovirus-mediated ubiquitination alters protein-RNA binding and aids viral RNA processing

Adenovirus-mediated ubiquitination alters protein-RNA binding and aids viral RNA processing. Herrmann C, Dybas JM, Liddle JC, Price AM, Hayer KE, Lauman R, Purman CE, Charman M, Kim ET, Garcia BA, Weitzman MD. Nat Microbiol. 2020 Jul 13. doi: 10.1038/s41564-020-0750-9. Online ahead of print.

Histone Acetyltransferase MOF Blocks Acquisition of Quiescence in Ground-State ESCs through Activating Fatty Acid Oxidation

Histone Acetyltransferase MOF Blocks Acquisition of Quiescence in Ground-State ESCs through Activating Fatty Acid Oxidation.  Khoa LTP, Tsan YC, Mao F, Kremer DM, Sajjakulnukit P, Zhang L, Zhou B, Tong X, Bhanu NV, Choudhary C, Garcia BA, Yin L, Smith GD, Saunders TL, Bielas SL, Lyssiotis CA, Dou Y. Cell Stem Cell. 2020 Jun 24:S1934-5909(20)30272-1.

SIRT6 mono-ADP ribosylates KDM2A to locally increase H3K36me2 at DNA damage sites to inhibit transcription and promote repair

SIRT6 mono-ADP ribosylates KDM2A to locally increase H3K36me2 at DNA damage sites to inhibit transcription and promote repair. Rezazadeh S, Yang D, Biashad SA, Firsanov D, Takasugi M, Gilbert M, Tombline G, Bhanu NV, Garcia BA, Seluanov A, Gorbunova V. Aging (Albany NY). 2020 Jun 25;12.

Improvements on the quantitative analysis of Trypanosoma cruzi histone post translational modifications: Study of changes in epigenetic marks through the parasite’s metacyclogenesis and life cycle

Improvements on the quantitative analysis of Trypanosoma cruzi histone post translational modifications: Study of changes in epigenetic marks through the parasite’s metacyclogenesis and life cycle.  de Lima LP, Poubel SB, Yuan ZF, Rosón JN, de Luna Vitorino FN, Holetz FB, Garcia BA, da Cunha JPC. J Proteomics. 2020 May 29:103847. doi: 10.1016/j.jprot.2020.103847.

Disruption of ATRX-RNA interactions uncovers roles in ATRX localization and PRC2 function

Disruption of ATRX-RNA interactions uncovers roles in ATRX localization and PRC2 function. Ren W, Medeiros N, Warneford-Thomson R, Wulfridge P, Yan Q, Bian J, Sidoli S, Garcia BA, Skordalakes E, Joyce E, Bonasio R, Sarma K. Nat Commun. 2020 May 6;11(1):2219.

Human chimeric antigen receptor macrophages for cancer immunotherapy

Human chimeric antigen receptor macrophages for cancer immunotherapy. Klichinsky M, Ruella M, Shestova O, Lu XM, Best A, Zeeman M, Schmierer M, Gabrusiewicz K, Anderson NR, Petty NE, Cummins KD, Shen F, Shan X, Veliz K, Blouch K, Yashiro-Ohtani Y, Kenderian SS, Kim MY, O’Connor RS, Wallace SR, Kozlowski MS, Marchione DM, Shestov M, Garcia BA, June CH, Gill S. Nat Biotechnol. 2020 Mar 23. doi: 10.1038/s41587-020-0462-y. [Epub ahead of print]

Comprehensive Map of the Artemisia annua Proteome and Quantification of Differential Protein Expression in Chemotypes Producing High vs Low Content of Artemisinin

Comprehensive Map of the Artemisia annua Proteome and Quantification of Differential Protein Expression in Chemotypes Producing High vs Low Content of Artemisinin. Chen M, Yan T, Ji L, Yu D, Sidoli S, Yuan Z, Cai C, Chen J, Tang Y, Shen Q, Pan Q, Fu X, Xin K, Liao L, Garcia BA, Yan W, Tang K. Proteomics. 2020 May;20(10):e1900310.

Unraveling the RNA modification code with mass spectrometry

Unraveling the RNA modification code with mass spectrometry. Lauman R, Garcia BA. Mol Omics. 2020 Apr 14. doi: 10.1039/c8mo00247a. [Epub ahead of print]