Publications

A computational platform for high-throughput analysis of RNA sequences and modifications by mass spectrometry.

A computational platform for high-throughput analysis of RNA sequences and modifications by mass spectrometry. Wein S, Andrews B, Sachsenberg T, Santos-Rosa H, Kohlbacher O, Kouzarides T, Garcia BA, Weisser H. Nat Commun. 2020 Feb 17;11(1):926.

HYPERsol: High-Quality Data from Archival FFPE Tissue for Clinical Proteomics

HYPERsol: High-Quality Data from Archival FFPE Tissue for Clinical Proteomics. Marchione DM, Ilieva I, Devins K, Sharpe D, Pappin DJ, Garcia BA, Wilson JP, Wojcik JB. J Proteome Res. 2020 Feb 7;19(2):973-983.

Quantitative live cell imaging reveals influenza virus manipulation of Rab11A transport through reduced dynein association

Quantitative live cell imaging reveals influenza virus manipulation of Rab11A transport through reduced dynein association. Bhagwat AR, Le Sage V, Nturibi E, Kulej K, Jones J, Guo M, Tae Kim E, Garcia BA, Weitzman MD, Shroff H, Lakdawala SS. Nat Commun. 2020 Jan 7;11(1):23.

Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance

Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance. Iglesias N, Paulo JA, Tatarakis A, Wang X, Edwards AL, Bhanu NV, Garcia BA, Haas W, Gygi SP, Moazed D. Mol Cell. 2020 Jan 2;77(1):51-66.

Deep profiling and custom databases improve detection of proteoforms generated by alternative splicing

Deep profiling and custom databases improve detection of proteoforms generated by alternative splicing. Agosto LM, Gazzara MR, Radens CM, Sidoli S, Baeza J, Garcia BA, Lynch KW. Genome Res. 2019 Dec;29(12):2046-2055.

Alcohol metabolism contributes to brain histone acetylation

Alcohol metabolism contributes to brain histone acetylation.  Mews P, Egervari G, Nativio R, Sidoli S, Donahue G, Lombroso SI, Alexander DC, Riesche SL, Heller EA, Nestler EJ, Garcia BA, Berger SL. Nature. 2019 Oct;574(7780):717-721.

Recognition of Histone Crotonylation by Taf14 Links Metabolic State to Gene Expression

Recognition of Histone Crotonylation by Taf14 Links Metabolic State to Gene Expression. Gowans GJ, Bridgers JB, Zhang J, Dronamraju R, Burnetti A, King DA, Thiengmany AV, Shinsky SA, Bhanu NV, Garcia BA, Buchler NE, Strahl BD, Morrison AJ. Mol Cell. 2019 Oct 23. pii: S1097-2765(19)30734-8.

Azi-medetomidine: Synthesis and Characterization of a Novel α2 Adrenergic Photoaffinity Ligand

Azi-medetomidine: Synthesis and Characterization of a Novel α2 Adrenergic Photoaffinity Ligand. McKinstry-Wu AR, Woll KA, Joseph TT, Bu W, White ER, Bhanu NV, Garcia BA, Brannigan G, Dailey WP, Eckenhoff RG. ACS Chem Neurosci. 2019 Nov 20;10(11):4716-4728.

Quantitative analysis of global protein lysine methylation by mass spectrometry

Quantitative analysis of global protein lysine methylation by mass spectrometry. Lund PJ, Lehman SM, Garcia BA. Methods Enzymol. 2019;626:475-498.

Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation

Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation. Klein BJ, Jang SM, Lachance C, Mi W, Lyu J, Sakuraba S, Krajewski K, Wang WW, Sidoli S, Liu J, Zhang Y, Wang X, Warfield BM, Kueh AJ, Voss AK, Thomas T, Garcia BA, Liu WR, Strahl BD, Kono H, Li W, Shi X, Côté J, Kutateladze TG. Nat Commun. 2019 Oct 17;10(1):4724.